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It is a covert war in which the CIA has recruited gangs of unsavory warlords to hunt down and kidnap Islamic militants and—according to Isse and civil rights activists—secretly imprison them offshore, aboard U.S. warships.
It is a standoff war in which the Pentagon lobs million-dollar cruise missiles into a famine-haunted African wasteland the size of Texas, hoping to kill lone terror suspects who might be dozing in candlelit huts. (The raids' success or failure is almost impossible to verify.)
"Somalia is one of the great unrecognized U.S. policy failures since 9/11," said Ken Menkhaus, a leading Somalia scholar at Davidson College in North Carolina. "By any rational metric, what we've ended up with there today is the opposite of what we wanted."
"I captured Isse for the Americans," said Mohamed Afrah Qanyare. "The Americans contracted us to do certain things, and we did them. Isse put up resistance so we shot him. But he survived."
A scar-faced warlord in a business suit, Qanyare is a member of Somalia's weak transitional government. Today he divides his days between lawless Mogadishu and luxury hotels in Nairobi.
But four years ago, his militia helped form the kernel of a CIA-created mercenary force called the Alliance for the Restoration of Peace and Counter-Terrorism in Somalia. The unit cobbled together some of the world's most violent, wily and unreliable clan militias—including gangs that had attacked U.S. forces in the early 1990s—to confront a rising tide of Islamic militancy in Somalia's anarchic capital.
The Somalis on the CIA payroll engaged in a grim tit-for-tat exchange of kidnappings and assassinations with extremists. And Isse was one of their catches.
He was wounded in a CIA-ordered raid on his Mogadishu safe house in June 2004, according to Qanyare and Matt Bryden, one of the world's leading scholars of the Somali insurgency. They say Isse was then loaded aboard a U.S. military helicopter summoned by satellite phone and was flown, bleeding, to an offshore U.S. vessel.